科学家成功定序袋獾基因组
文章来源:未知 文章作者:enread 发布时间:2011-06-28 02:39 字体: [ ]  进入论坛
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A revolutionary species-preservation approach based on whole-genome analyses of two Tasmanian devils(袋獾) -- one that had died of a contagious1(感染性的) cancer known as Devil Facial Tumor2 Disease (DFTD) and one healthy animal -- has been used to develop a theoretical model to predict which individuals would need to be kept in captivity3 to maximize chances of preserving enough genetic4 diversity for the species to survive. The research helps to formulate5 one possible plan of action to prevent the extinction6 of the Tasmanian devil -- a marsupial7(有袋类动物) found in the wild exclusively in the Australian island-state of Tasmania. The research model also may be extended to other endangered species. The team, led by Stephan Schuster, a professor of biochemistry and molecular8 biology at Penn State University; Webb Miller9, a professor of biology and computer science and engineering at Penn State University; and Vanessa Hayes of the Venter Institute in San Diego, includes other scientists at institutions and universities in Australia, Denmark, and the United States. The results of the study will be published in the journal Proceedings10 of the National Academy of Sciences. Additional information about the team's research is posted at the project website, http://tasmaniandevil.psu.edu. DFTD, which disfigures the victim and causes death from starvation or suffocation11(窒息) within months, is an unusual sort of cancer that first was observed on the east coast of Tasmania just 15 years ago, and since has spread rapidly westward12, threatening the species with extinction. "The disease is like nothing we know in humans or in virtually any other animal. It acts like a virus but it actually is spread by a whole cancerous cell that arose in one individual several decades ago," Schuster explained. "This malignant13 cell is transferred directly from one individual to another through biting, mating, or even touching14. Just imagine a human cancer that spread through a handshake. It would eradicate15(根除,消灭) our species very quickly." The scientists explained that if a number of healthy Tasmanian devils were kept in zoos and other facilities in "protective custody16" until the tumor ran its course and disappeared in the wild, then the captive animals could be released back into their former habitat and the population could begin to grow anew. "However, it's not just a matter of scooping17 up a few individuals at random18 and locking them away," Miller explained. "Our team developed a smarter, more calculated approach: We asked ourselves, which individuals would be the best candidates for 'protective custody,' and what criteria19 would we use to make those determinations? We soon realized that the answer was to compile genetic data and to analyze20 it in novel ways."

The team approached the extinction problem on two fronts. The first was to sequence the complete genomes -- 3.2 billion base pairs each -- of two individual Tasmanian devils. One was a male called "Cedric," who had a natural resistance to two strains of DFTD, but succumbed21(屈服,死) after being infected with a different strain of the disease last year. The other was a female called "Spirit," who had contracted the vicious(恶毒的) cancer in the wild. In addition, the scientists sequenced the genome of one of Spirit's tumors. Because the two animals had originated in the extreme northwest and southeast regions of Tasmania, respectively, they represented the maximal geographic22 spread of the species -- a measure that is used as an approximation(近似) of genetic diversity. The researchers then began an analysis of the genomic data from the two animals, and of the genetic characteristics of the tumor. Using these data, they created a model that could determine which individual animals should be selected for captive breeding programs, such as the ones currently underway in Tasmania and on mainland Australia.



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1 contagious TZ0yl     
adj.传染性的,有感染力的
参考例句:
  • It's a highly contagious infection.这种病极易传染。
  • He's got a contagious laugh.他的笑富有感染力。
2 tumor fKxzm     
n.(肿)瘤,肿块(英)tumour
参考例句:
  • He was died of a malignant tumor.他死于恶性肿瘤。
  • The surgeons irradiated the tumor.外科医生用X射线照射那个肿瘤。
3 captivity qrJzv     
n.囚禁;被俘;束缚
参考例句:
  • A zoo is a place where live animals are kept in captivity for the public to see.动物园是圈养动物以供公众观看的场所。
  • He was held in captivity for three years.他被囚禁叁年。
4 genetic PgIxp     
adj.遗传的,遗传学的
参考例句:
  • It's very difficult to treat genetic diseases.遗传性疾病治疗起来很困难。
  • Each daughter cell can receive a full complement of the genetic information.每个子细胞可以收到遗传信息的一个完全补偿物。
5 formulate L66yt     
v.用公式表示;规划;设计;系统地阐述
参考例句:
  • He took care to formulate his reply very clearly.他字斟句酌,清楚地做了回答。
  • I was impressed by the way he could formulate his ideas.他陈述观点的方式让我印象深刻。
6 extinction sPwzP     
n.熄灭,消亡,消灭,灭绝,绝种
参考例句:
  • The plant is now in danger of extinction.这种植物现在有绝种的危险。
  • The island's way of life is doomed to extinction.这个岛上的生活方式注定要消失。
7 marsupial 47zzn     
adj.有袋的,袋状的
参考例句:
  • Koala is an arboreal Australian marsupial.考拉是一种澳大利亚树栖有袋动物。
  • The marsupial has been in decline for decades due to urban sprawl from car accidentsdog attacks.这种有袋动物其数量在过去几十年间逐渐减少,主要原因是城市的扩张、车祸和狗的袭击。
8 molecular mE9xh     
adj.分子的;克分子的
参考例句:
  • The research will provide direct insight into molecular mechanisms.这项研究将使人能够直接地了解分子的机理。
  • For the pressure to become zero, molecular bombardment must cease.当压强趋近于零时,分子的碰撞就停止了。
9 miller ZD6xf     
n.磨坊主
参考例句:
  • Every miller draws water to his own mill.磨坊主都往自己磨里注水。
  • The skilful miller killed millions of lions with his ski.技术娴熟的磨坊主用雪橇杀死了上百万头狮子。
10 proceedings Wk2zvX     
n.进程,过程,议程;诉讼(程序);公报
参考例句:
  • He was released on bail pending committal proceedings. 他交保获释正在候审。
  • to initiate legal proceedings against sb 对某人提起诉讼
11 suffocation b834eadeaf680f6ffcb13068245a1fed     
n.窒息
参考例句:
  • The greatest dangers of pyroclastic avalanches are probably heat and suffocation. 火成碎屑崩落的最大危害可能是炽热和窒息作用。 来自辞典例句
  • The room was hot to suffocation. 房间热得闷人。 来自辞典例句
12 westward XIvyz     
n.西方,西部;adj.西方的,向西的;adv.向西
参考例句:
  • We live on the westward slope of the hill.我们住在这座山的西山坡。
  • Explore westward or wherever.向西或到什么别的地方去勘探。
13 malignant Z89zY     
adj.恶性的,致命的;恶意的,恶毒的
参考例句:
  • Alexander got a malignant slander.亚历山大受到恶意的诽谤。
  • He started to his feet with a malignant glance at Winston.他爬了起来,不高兴地看了温斯顿一眼。
14 touching sg6zQ9     
adj.动人的,使人感伤的
参考例句:
  • It was a touching sight.这是一幅动人的景象。
  • His letter was touching.他的信很感人。
15 eradicate Ui1zn     
v.根除,消灭,杜绝
参考例句:
  • These insects are very difficult to eradicate.这些昆虫很难根除。
  • They are already battling to eradicate illnesses such as malaria and tetanus.他们已经在努力消灭疟疾、破伤风等疾病。
16 custody Qntzd     
n.监护,照看,羁押,拘留
参考例句:
  • He spent a week in custody on remand awaiting sentence.等候判决期间他被还押候审一个星期。
  • He was taken into custody immediately after the robbery.抢劫案发生后,他立即被押了起来。
17 scooping 5efbad5bbb4dce343848e992b81eb83d     
n.捞球v.抢先报道( scoop的现在分词 );(敏捷地)抱起;抢先获得;用铲[勺]等挖(洞等)
参考例句:
  • Heated ice cream scoop is used for scooping really cold ice cream. 加热的冰淇淋勺是用来舀非常凉的冰淇淋的。 来自互联网
  • The scoop-up was the key phase during a scooping cycle. 3个区间中,铲取区间是整个作业循环的关键。 来自互联网
18 random HT9xd     
adj.随机的;任意的;n.偶然的(或随便的)行动
参考例句:
  • The list is arranged in a random order.名单排列不分先后。
  • On random inspection the meat was found to be bad.经抽查,发现肉变质了。
19 criteria vafyC     
n.标准
参考例句:
  • The main criterion is value for money.主要的标准是钱要用得划算。
  • There are strict criteria for inclusion in the competition.参赛的标准很严格。
20 analyze RwUzm     
vt.分析,解析 (=analyse)
参考例句:
  • We should analyze the cause and effect of this event.我们应该分析这场事变的因果。
  • The teacher tried to analyze the cause of our failure.老师设法分析我们失败的原因。
21 succumbed 625a9b57aef7b895b965fdca2019ba63     
不再抵抗(诱惑、疾病、攻击等)( succumb的过去式和过去分词 ); 屈从; 被压垮; 死
参考例句:
  • The town succumbed after a short siege. 该城被围困不久即告失守。
  • After an artillery bombardment lasting several days the town finally succumbed. 在持续炮轰数日后,该城终于屈服了。
22 geographic tgsxb     
adj.地理学的,地理的
参考例句:
  • The city's success owes much to its geographic position. 这座城市的成功很大程度上归功于它的地理位置。 来自《简明英汉词典》
  • Environmental problems pay no heed to these geographic lines. 环境问题并不理会这些地理界限。 来自英汉非文学 - 环境法 - 环境法
TAG标签: species genetic genome
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