A hidden and never before recognized layer of information in the genetic2 code has been uncovered by a team of scientists at the University of California, San Francisco (UCSF) thanks to a technique developed at UCSF called ribosome(核糖体) profiling, which enables the measurement of gene1 activity inside living cells -- including the speed with which proteins are made. By measuring the rate of protein production in bacteria, the team discovered that slight genetic alterations3 could have a dramatic effect. This was true even for seemingly insignificant4 genetic changes known as "silent mutations," which swap5 out a single DNA6 letter without changing the ultimate gene product. To their surprise, the scientists found these changes can slow the protein production process to one-tenth of its normal speed or less.
As described March 28 in the journal Nature, the speed change is caused by information contained in what are known as redundant7 codons(密码子) -- small pieces of DNA that form part of the genetic code. They were called "redundant" because they were previously8 thought to contain duplicative rather than unique instructions.
This new discovery challenges half a century of fundamental assumptions in biology. It may also help speed up the industrial production of proteins, which is crucial for making biofuels and biological drugs used to treat many common diseases, ranging from diabetes9 to cancer.
"The genetic code has been thought to be redundant, but redundant codons are clearly not identical," said Jonathan Weissman, PhD, a Howard Hughes Medical Institute Investigator10 in the UCSF School of Medicine Department of Cellular11 and Molecular12 Pharmacology.
"We didn't understand much about the rules," he added, but the new work suggests nature selects among redundant codons based on genetic speed as well as genetic meaning.
Similarly, a person texting a message to a friend might opt13 to type, "NP" instead of "No problem." They both mean the same thing, but one is faster to thumb than the other.