解开生物网络的复杂性
文章来源:未知 文章作者:enread 发布时间:2012-03-07 04:46 字体: [ ]  进入论坛
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A new approach to disentangling(解决,松开) the complexities1 of biological networks, such as the way in which proteins interact in our body's cells has been developed by researchers in China. The team's algorithm(算法) could allow biologists and biomedical researchers to unravel2 new clues about how cells work and what goes awry3 with such networks in various diseases, such as Alzheimer's disease and cancer. We find networks everywhere in technology, in nature, in our bodies. They are ubiquitous(普遍存在的) in countless4 fields of research from electronic circuitry to social networks from transportation systems to biological systems. Researchers have demonstrated that although networks may superficially be very disparate in nature they nevertheless share many global properties, such as "small world" and "scale free" characteristics. This means that understanding one kind of network can help us understand another.

However, to dig deeper still into the universal characteristics of networks requires us to understand the basic structural5 elements present in a particular -- the so-called network "motifs6." Motifs are patterns of interconnections between the nodes in a network, whether transistors7, neurons Facebook users, or in molecular8 biology, proteins. Motifs that occur in significantly larger numbers in real networks than in randomised networks can be used to characterise local features of even the most complex networks. With high-throughput analytical10 techniques, molecular biologists are beginning to uncover network motifs in protein systems, and likewise in metabolism11(新陈代谢) , the brain, the spread of pathogens and many other areas of interest.

Computer scientists Guimin Qin and Lin Gao of Xidian University in Shaanxi, China, have devised an efficient algorithm for detecting motifs in protein networks. The algorithm first searches for specific non-tree-like sub-structures in a network that are not so commonly found in random9 networks. It then classifies these sub-structures and clusters them hierarchically to reveal the presence of recurring12 motifs in the network. The team has applied13 the algorithm to a network of protein-protein interaction (PPI) for the well-studied bacterium14 Escherichia coli and the yeast15 Saccharomyces cerevisiae(啤酒,麦酒) .

"Our experimental results show that the algorithm can efficiently16 discover motifs, which are consistent with current biology knowledge," the team says. Importantly, however, the approach has also revealed several novel motifs previously17 unrecognised. "Our algorithm can detect several consensus18 motifs with a given size, which may help biologists go further into cellular19 process," the team adds.



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1 complexities b217e6f6e3d61b3dd560522457376e61     
复杂性(complexity的名词复数); 复杂的事物
参考例句:
  • The complexities of life bothered him. 生活的复杂使他困惑。
  • The complexities of life bothered me. 生活的杂乱事儿使我心烦。
2 unravel Ajzwo     
v.弄清楚(秘密);拆开,解开,松开
参考例句:
  • He was good with his hands and could unravel a knot or untangle yarn that others wouldn't even attempt.他的手很灵巧,其他人甚至都不敢尝试的一些难解的绳结或缠在一起的纱线,他都能解开。
  • This is the attitude that led him to unravel a mystery that long puzzled Chinese historians.正是这种态度使他解决了长期以来使中国历史学家们大惑不解的谜。
3 awry Mu0ze     
adj.扭曲的,错的
参考例句:
  • She was in a fury over a plan that had gone awry. 计划出了问题,她很愤怒。
  • Something has gone awry in our plans.我们的计划出差错了。
4 countless 7vqz9L     
adj.无数的,多得不计其数的
参考例句:
  • In the war countless innocent people lost their lives.在这场战争中无数无辜的人丧失了性命。
  • I've told you countless times.我已经告诉你无数遍了。
5 structural itXw5     
adj.构造的,组织的,建筑(用)的
参考例句:
  • The storm caused no structural damage.风暴没有造成建筑结构方面的破坏。
  • The North American continent is made up of three great structural entities.北美大陆是由三个构造单元组成的。
6 motifs ad7b2b52ecff1d960c02db8f14bea812     
n. (文艺作品等的)主题( motif的名词复数 );中心思想;基本模式;基本图案
参考例句:
  • I try to develop beyond the old motifs. 我力求对传统的花纹图案做到推陈出新。 来自辞典例句
  • American Dream is one of the most important motifs of American literature. “美国梦”是美国文学最重要的母题之一。 来自互联网
7 transistors ff750796e6ff1fb40d6a8248a6485dc3     
晶体管( transistor的名词复数 ); 晶体管收音机,半导体收音机
参考例句:
  • In semiconductor receivers transistors take the place of vacuum tubes. 在半导体收音机中晶体管代替了真空管。
  • We often turn to this handbook for information on transistors. 我们常从这本手册查阅有关晶体管的资料。
8 molecular mE9xh     
adj.分子的;克分子的
参考例句:
  • The research will provide direct insight into molecular mechanisms.这项研究将使人能够直接地了解分子的机理。
  • For the pressure to become zero, molecular bombardment must cease.当压强趋近于零时,分子的碰撞就停止了。
9 random HT9xd     
adj.随机的;任意的;n.偶然的(或随便的)行动
参考例句:
  • The list is arranged in a random order.名单排列不分先后。
  • On random inspection the meat was found to be bad.经抽查,发现肉变质了。
10 analytical lLMyS     
adj.分析的;用分析法的
参考例句:
  • I have an analytical approach to every survey.对每项调查我都采用分析方法。
  • As a result,analytical data obtained by analysts were often in disagreement.结果各个分析家所得的分析数据常常不一致。
11 metabolism 171zC     
n.新陈代谢
参考例句:
  • After years of dieting,Carol's metabolism was completely out of whack.经过数年的节食,卡罗尔的新陈代谢完全紊乱了。
  • All living matter undergoes a process of metabolism.生物都有新陈代谢。
12 recurring 8kLzK8     
adj.往复的,再次发生的
参考例句:
  • This kind of problem is recurring often. 这类问题经常发生。
  • For our own country, it has been a time for recurring trial. 就我们国家而言,它经过了一个反复考验的时期。
13 applied Tz2zXA     
adj.应用的;v.应用,适用
参考例句:
  • She plans to take a course in applied linguistics.她打算学习应用语言学课程。
  • This cream is best applied to the face at night.这种乳霜最好晚上擦脸用。
14 bacterium BN7zE     
n.(pl.)bacteria 细菌
参考例句:
  • The bacterium possibly goes in the human body by the mouth.细菌可能通过口进入人体。
  • A bacterium is identified as the cause for his duodenal ulcer.一种细菌被断定为造成他十二指肠溃疡的根源。
15 yeast 7VIzu     
n.酵母;酵母片;泡沫;v.发酵;起泡沫
参考例句:
  • Yeast can be used in making beer and bread.酵母可用于酿啤酒和发面包。
  • The yeast began to work.酵母开始发酵。
16 efficiently ZuTzXQ     
adv.高效率地,有能力地
参考例句:
  • The worker oils the machine to operate it more efficiently.工人给机器上油以使机器运转更有效。
  • Local authorities have to learn to allocate resources efficiently.地方政府必须学会有效地分配资源。
17 previously bkzzzC     
adv.以前,先前(地)
参考例句:
  • The bicycle tyre blew out at a previously damaged point.自行车胎在以前损坏过的地方又爆开了。
  • Let me digress for a moment and explain what had happened previously.让我岔开一会儿,解释原先发生了什么。
18 consensus epMzA     
n.(意见等的)一致,一致同意,共识
参考例句:
  • Can we reach a consensus on this issue?我们能在这个问题上取得一致意见吗?
  • What is the consensus of opinion at the afternoon meeting?下午会议上一致的意见是什么?
19 cellular aU1yo     
adj.移动的;细胞的,由细胞组成的
参考例句:
  • She has a cellular telephone in her car.她的汽车里有一部无线通讯电话机。
  • Many people use cellular materials as sensitive elements in hygrometers.很多人用蜂窝状的材料作为测量温度的传感元件。
TAG标签: cells networks biological
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